RBMS1

Protein-coding gene in the species Homo sapiens
RBMS1
Available structures
PDBOrtholog search: PDBe RCSB
List of PDB id codes

1X5O

Identifiers
AliasesRBMS1, C2orf12, HCC-4, MSSP, MSSP-1, MSSP-2, MSSP-3, SCR2, YC1, RNA binding motif single stranded interacting protein 1
External IDsOMIM: 602310; MGI: 1861774; HomoloGene: 9640; GeneCards: RBMS1; OMA:RBMS1 - orthologs
Gene location (Human)
Chromosome 2 (human)
Chr.Chromosome 2 (human)[1]
Chromosome 2 (human)
Genomic location for RBMS1
Genomic location for RBMS1
Band2q24.2Start160,272,151 bp[1]
End160,493,807 bp[1]
Gene location (Mouse)
Chromosome 2 (mouse)
Chr.Chromosome 2 (mouse)[2]
Chromosome 2 (mouse)
Genomic location for RBMS1
Genomic location for RBMS1
Band2|2 C1.2Start60,580,537 bp[2]
End60,793,536 bp[2]
RNA expression pattern
Bgee
HumanMouse (ortholog)
Top expressed in
  • tail of epididymis

  • myocardium of left ventricle

  • decidua

  • cardiac muscle tissue of right atrium

  • pericardium

  • buccal mucosa cell

  • tendon of biceps brachii

  • skin of arm

  • metanephric glomerulus

  • skin of hip
Top expressed in
  • stroma of bone marrow

  • gastrula

  • ciliary body

  • left lung lobe

  • decidua

  • iris

  • skin of external ear

  • conjunctival fornix

  • endothelial cell of lymphatic vessel

  • genital tubercle
More reference expression data
BioGPS




More reference expression data
Gene ontology
Molecular function
  • single-stranded DNA binding
  • DNA binding
  • double-stranded DNA binding
  • protein binding
  • nucleic acid binding
  • RNA binding
  • mRNA 3'-UTR binding
  • poly(A) binding
  • poly(U) RNA binding
Cellular component
  • nucleus
  • cytoplasm
  • cytosol
  • ribonucleoprotein complex
Biological process
  • DNA replication
  • RNA processing
Sources:Amigo / QuickGO
Orthologs
SpeciesHumanMouse
Entrez

5937

56878

Ensembl

ENSG00000153250

ENSMUSG00000026970

UniProt

P29558

Q91W59

RefSeq (mRNA)

NM_002897
NM_016836
NM_016839

NM_001141931
NM_001141932
NM_020296

RefSeq (protein)

NP_002888
NP_058520

NP_001135403
NP_001135404
NP_064692

Location (UCSC)Chr 2: 160.27 – 160.49 MbChr 2: 60.58 – 60.79 Mb
PubMed search[3][4]
Wikidata
View/Edit HumanView/Edit Mouse

RNA-binding motif, single-stranded-interacting protein 1 is a protein that in humans is encoded by the RBMS1 gene.[5][6][7][8]

Function

This gene encodes a member of a small family of proteins which bind single stranded DNA/RNA. These proteins are characterized by the presence of two sets of ribonucleoprotein consensus sequence (RNP-CS) that contain conserved motifs, RNP1 and RNP2, originally described in RNA binding proteins, and required for DNA binding. These proteins have been implicated in such diverse functions as DNA replication, gene transcription, cell cycle progression and apoptosis. Multiple transcript variants, resulting from alternative splicing and encoding different isoforms, have been described. Several of these were isolated by virtue of their binding to either strand of an upstream element of c-myc (MSSPs), or by phenotypic complementation of cdc2 and cdc13 mutants of yeast (scr2), or as a potential human repressor of HIV-1 and ILR-2 alpha promoter transcription (YC1). A pseudogene for this locus is found on chromosome 12.[8]

Interactions

RBMS1 has been shown to interact with Polymerase (DNA directed), alpha 1.[9]

References

  1. ^ a b c GRCh38: Ensembl release 89: ENSG00000153250 – Ensembl, May 2017
  2. ^ a b c GRCm38: Ensembl release 89: ENSMUSG00000026970 – Ensembl, May 2017
  3. ^ Lua error in Module:Citation/CS1/Configuration at line 2083: attempt to index a boolean value.
  4. ^ Lua error in Module:Citation/CS1/Configuration at line 2083: attempt to index a boolean value.
  5. ^ Lua error in Module:Citation/CS1/Configuration at line 2083: attempt to index a boolean value.
  6. ^ Lua error in Module:Citation/CS1/Configuration at line 2083: attempt to index a boolean value.
  7. ^ Lua error in Module:Citation/CS1/Configuration at line 2083: attempt to index a boolean value.
  8. ^ a b Lua error in Module:Citation/CS1/Configuration at line 2083: attempt to index a boolean value.
  9. ^ Lua error in Module:Citation/CS1/Configuration at line 2083: attempt to index a boolean value.

Further reading

  • Lua error in Module:Citation/CS1/Configuration at line 2083: attempt to index a boolean value.
  • Lua error in Module:Citation/CS1/Configuration at line 2083: attempt to index a boolean value.
  • Lua error in Module:Citation/CS1/Configuration at line 2083: attempt to index a boolean value.
  • v
  • t
  • e
  • 1x4e: Solution structure of RRM domain in RNA binding motif, single-stranded interacting protein 2
    1x4e: Solution structure of RRM domain in RNA binding motif, single-stranded interacting protein 2
  • 1x5o: Solution structure of RRM domain in RNA binding motif, single-stranded interacting protein 1
    1x5o: Solution structure of RRM domain in RNA binding motif, single-stranded interacting protein 1


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